CDS

Accession Number TCMCG006C120260
gbkey CDS
Protein Id XP_013642963.1
Location complement(join(21532527..21532614,21532745..21532900,21532989..21533214,21533287..21533476,21533557..21533786,21533878..21534055,21534321..21534503,21534679..21534959,21535041..21535214,21535393..21535533,21535801..21535927,21536007..21536114,21536278..21536394,21536517..21536642,21536770..21536823,21536996..21537061,21537155..21537343,21537435..21537548,21537648..21537733,21537826..21538294,21538378..21539079))
Gene LOC106347894
GeneID 106347894
Organism Brassica napus

Protein

Length 1334aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013787509.2
Definition abnormal spindle-like microcephaly-associated protein homolog isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category Z
Description Calponin homology (CH) domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K16743        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGAATGAAGAAAACGAACCAACGTGCGCTACACCAGCGCCGCGGCCGCGTAATCCTCAGTCATCACACTTCACCGACATATCCAATTTCAAAACTCCGCGGCGTCCTTCCTTTATCAAATCAAATCTCGGCAACACTCCGTATCCTCCTCAATTCTTCACCGCATCTAAGCAAACTCCCAAATCTATGTCCTCCACCTTCCGCCGTCCCTCGCTCCTTCCTTCTCACGCGTCTCGCTCCAAGGTCGCAGCTTCCTCGAGGCGGCTTAGGGCATTCGAGCTTCAGCAATCGCAGTCTTCTCGCAAGGCTGAGTTGAATAAAGAGAAGAGCCTCAGATCTCTCGCTAAATCACTTACCGTGTGGCTTAACTTCCTCTTTGAAAACCCTGAAAGTTGCGGTTGCGATCCGTTAGAGAATGGCGTTTCTGTTGGTAGAGTTGGACATGCGAAGAGAGATAGTTGCGAAGCTTTACGAGGCGGTAACTCAGTGGGTGTGGATACCATGTGGCGTAGCCCCAAAAAGTCGAGGACTTTAGGCTGGTCTGGTGAGAAAGGATCATCCTTGAGTGGCTCCAAGTATTCAACGCTGAGGGAGTCTTTGAAAGAAGTGTGTAGCTTAGATGATTTGAAGCAGAGGATGCAGTTTCACTTGAGTTTGGGAAGTTGCAAGGAGATTTTCGATGTGATGACCCGTGTTACCAAGAATATCGATGAAGGGAGGATAAAGATGAAACCACAATGCCTTCTTGTAACTGATTTTGGACTGAAGGAGAAGGCCGTCAAGGCACTGATGTGTTACAACCAAGTTTGGCTTCGTCTAGGGTTGTATATCATCTTTGGCGGTGATTCCTTTTTGTGTGACAGCGAAGTTAACTCAGATCAAGAAACGGCATTCTTGAAGATGGTAATCAACAAGCAGTTTTTCTCCCATGACGGCCTTGCTAGAGCCTTTGCCTATAACAAGATGGTTGAGGGTTTATACAGACCAGGGTACTATGAAGCCCTTGGAACCGTGATTTTGAAGAGGATTCTGTTGCTTGTCCTTATATTAGATAGAGCTAAATCTCAAAGCTGTATTTCACTCAAGTATGGGATTGATGGGATAGATGGTGGCTCTCCCCTCTTGTTTTCAGAGAAATCTAGCTTAAAGTCTAGCCATCAACTTCTAAGTGAACTCCTGCCCTCTGATGTAATGCATGGAGAAGGGAATCTCCTAGCGCATCTAGTGATTATAGGGTACAAAATACCTTATCAGCAGTCTCCTATAGCTGAATATGAATTTAGAGTGAGAGACTTGTTTGGTGACCTCCAAGATGGCGTGCGGCTCTGCAGAGCCATTCAACTACTTCTTCATGATCCATCCATTCTCACGAAAATGGTAGTTCCATCCGACAATCGAAAGAAGAAGTTGGCCAACTGTAGAGTTGCACTTCAGTATCTGAAGGATGCTGGTGTTTCATTGAAAGATGACGAAGGAATGATGATAACTATAGAAGATGTTGCAGATGGTGACAGAGAGCTCTCTATTTCACTGCTATGGAACATTTTTGTACATTTGCAGCTACCTCTTCTGATCAATGGGAAACTCTTGACAGAGGAAATCTACAAAGTCCAGGGGCTGGAACAGAATAATCAAATTATCATGGCTACTCCTCTGGAAATGCTCTTGAACTGGATCCAGTCAATTACCAAGAAGAATGACTTCAAGGTAGAAAACTTTGCATCATTGGTTGATGGAAAGGGAATATGGTTCTTGCTTGACTACTATTTTCGGCGAGAAGTTTGCTGTCCTTGTCTTCACGAAGAGGATCCTGGTGGTCAACAAGGCCCTCGATCAGTGATATCCAATACCGATTATCATGATGCAGTTCAGAACTTCATTCTGTCGCAAAAGTTGACAGCACTTTTGGGAAGTTTTCCTGAGGTTCTACAGATTGGGGACCTACTGGAACATAATGCAGTAGTTAGCAACCAAAGTGTGATTATACTGTTGGCTTTCTTATCATCAAAGCTGATCGTCAAGGAGAATATGGAGAAACTGAACTTTCATAAGTTGCTGTGCTCTAGCTGTCAAGATCAGGAGAAGAGATATTCGCGCATCAATTGCAGCATCTCGAAAGCAGTTAGAAATGAGGAACCGGACAGAGAAAACGGAGAAGATGCTACTAAAACTTTCCAGGCAATCAAAGCCTGGTGGCAGGAAATGGCCTACCAAAATTCTGTTGGAGAAGTTAGTAGCCGTACCCCGCTGGGTTCCTTGTCTAGAAAAATCACTATGGATTTCGAACGAGGTGATTCAAAAGCAGCAGTAGTCATACAATCGAATTTCAGGGGACTTCATGCACGCCGCAAGTTTAGGAAGAAATTGAAAGAAGTCTGCTTCTTACAAGCTGCTATTCGGACATGGTTGTCAGTGAAACATATAAAAGTTCTTGAAATATTCACTGTTGAGGAAGTTACTTTACAGTTATCAGAAAGATCAGCCAACTTAAAACCTGTAGCGAGATATGTCAAGTACATTGTTGAACGGAGTCGCTTTCTCAAGTTGAGGAAATCTGTTTTGGTCATTCAGAAAGCTGTAAGGAGGCATCAGCGAAACCTTCATCATGAGCTGAAAGCAGCACTCAAAATTCAGCAAGCTTGGAGGAGTTATAAAGACAAAGTTATCTCTTCTATCACTATCCAATCTTATGTTCGTGGATGGATCACACGGAGAATGTATATCAATTACAAATTGTGTTCCGTACTCATTCAAAGAGCTGTAAGGAAGCATCAGTGGAATCTTCATCATGAGCTGAAAGCAGCACTCAAAATTCAGCTAGCCTGGAGAAGTTATAAAGAACAAGTTATCTCCTCTATCACCATCCAATCTTATGTTCGTGGATGGAACACACGTAGAATGAATCGCAAATACAAGTTGTCTTCCGTACTCATTCAAAGATATTGCCGTGGTTGGCTGGCGAGAAGGAAGTTTTATCTTCAGAGAGAATCAACGATATGCATTCAGAGTGCTATCCGAAAATTTAACTGCATTATGTCGTTTCATGGCTACAAGCATGCAGCCACAGAGCTTCAACGGCTCGTTAGAGGACAAATTGTTCGAAGCAGGCTTCAAGGAGCTTCTTATCTCAATTCAAAACTTGACGAAGGCGTTTCCAGACTTCCACAACACAGCGTTGAGATGACAACACAGCTACATTCCGTCATTAAACTGCAGCGTTGGTGGAGGTTTCTCCATTCACAGAATGTAAGAAGAAAATCAGCAGTCTTGATACAGCAGCATATTCGAGGTGTATTTGCCAGGCAAAGAACTTCAATGGAAAGACGTTACATTGTCATGATTCAATCACACTGGAGAGGCTACCTCACACGCAAAGCTGCAAAGGCTCAAGTTCTGGATCTGAGAGTAAGAATGCAAACTTCTGCAGCAAACATAGATGACAAGAAACGCTTGATAAACAAGCTTCTCTCTGCGCTTTCGGAACTACTCAGCATGAAAAAGGTCCACAACATTCTTCACATTTGTGAAACTCTGGATTCGGCGACAAAGTACTCTGACAAATGCTGTGAAGAGCTTGTGGCAGCTGGAGCTATAGACAAGTTGCTAACACTGATCCGGTCTGCAAGCAGAAGCATACCTGATCAAGAAGTTTCAAAACATGCACTTTCAACTTTGAGACACCTGGCTCGTTACCCACAAATGGCAGATGAGTTAATAGACACGAAAGGATCTATCCAGACAATTTTCTGGGAACTACTCAGGAACAAAGAAGAAGCATATTTCATAGCATCAGATGTTCTGAAGAAGATATGCAAAAGCCAAAAAGGCGTAGAAGCAGTTCGAAAGCTTCCTGCTTTGGTTAAGCGATTACACGCCTTAGTTGAGGAGCTAACTCGTAAGGCAAACATGGAGAAGAGGAATGTTAAGGGTCAGGGTGGAAAAGAAAAGAGCGAGAGAAGATTAAAGGAGGCTGTTGAGCTTCTGAAGCTCATAACCAGCAGATGA
Protein:  
MNEENEPTCATPAPRPRNPQSSHFTDISNFKTPRRPSFIKSNLGNTPYPPQFFTASKQTPKSMSSTFRRPSLLPSHASRSKVAASSRRLRAFELQQSQSSRKAELNKEKSLRSLAKSLTVWLNFLFENPESCGCDPLENGVSVGRVGHAKRDSCEALRGGNSVGVDTMWRSPKKSRTLGWSGEKGSSLSGSKYSTLRESLKEVCSLDDLKQRMQFHLSLGSCKEIFDVMTRVTKNIDEGRIKMKPQCLLVTDFGLKEKAVKALMCYNQVWLRLGLYIIFGGDSFLCDSEVNSDQETAFLKMVINKQFFSHDGLARAFAYNKMVEGLYRPGYYEALGTVILKRILLLVLILDRAKSQSCISLKYGIDGIDGGSPLLFSEKSSLKSSHQLLSELLPSDVMHGEGNLLAHLVIIGYKIPYQQSPIAEYEFRVRDLFGDLQDGVRLCRAIQLLLHDPSILTKMVVPSDNRKKKLANCRVALQYLKDAGVSLKDDEGMMITIEDVADGDRELSISLLWNIFVHLQLPLLINGKLLTEEIYKVQGLEQNNQIIMATPLEMLLNWIQSITKKNDFKVENFASLVDGKGIWFLLDYYFRREVCCPCLHEEDPGGQQGPRSVISNTDYHDAVQNFILSQKLTALLGSFPEVLQIGDLLEHNAVVSNQSVIILLAFLSSKLIVKENMEKLNFHKLLCSSCQDQEKRYSRINCSISKAVRNEEPDRENGEDATKTFQAIKAWWQEMAYQNSVGEVSSRTPLGSLSRKITMDFERGDSKAAVVIQSNFRGLHARRKFRKKLKEVCFLQAAIRTWLSVKHIKVLEIFTVEEVTLQLSERSANLKPVARYVKYIVERSRFLKLRKSVLVIQKAVRRHQRNLHHELKAALKIQQAWRSYKDKVISSITIQSYVRGWITRRMYINYKLCSVLIQRAVRKHQWNLHHELKAALKIQLAWRSYKEQVISSITIQSYVRGWNTRRMNRKYKLSSVLIQRYCRGWLARRKFYLQRESTICIQSAIRKFNCIMSFHGYKHAATELQRLVRGQIVRSRLQGASYLNSKLDEGVSRLPQHSVEMTTQLHSVIKLQRWWRFLHSQNVRRKSAVLIQQHIRGVFARQRTSMERRYIVMIQSHWRGYLTRKAAKAQVLDLRVRMQTSAANIDDKKRLINKLLSALSELLSMKKVHNILHICETLDSATKYSDKCCEELVAAGAIDKLLTLIRSASRSIPDQEVSKHALSTLRHLARYPQMADELIDTKGSIQTIFWELLRNKEEAYFIASDVLKKICKSQKGVEAVRKLPALVKRLHALVEELTRKANMEKRNVKGQGGKEKSERRLKEAVELLKLITSR